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AI Horizons: The Art of Prompt Engineering in Healthcare

  • Writer: Shafi Ahmed
    Shafi Ahmed
  • Apr 14
  • 7 min read

"As artificial intelligence (AI) reshapes the landscape of modern medicine, mastering the art of prompt engineering becomes essential for healthcare professionals seeking to harness its full potential. Through thoughtful and strategic interaction with large language models (LLMs), we can unlock their full potential to elevate diagnostic accuracy, patient care, research, and operational efficiency."






Introduction: The Power of Prompt Engineering in Healthcare


Artificial Intelligence (AI) has emerged as a transformative force across industries, but nowhere is its impact more profound than in healthcare. In the rapidly evolving landscape of artificial intelligence (AI) in healthcare, large language models (LLMs) like Chatgpt, Bard, Claude, and others are transforming how healthcare professionals access knowledge, document cases, analyse data, and interact with patients.


These models are trained on vast datasets of text and code, enabling them to generate human-like responses based on patterns learned during training, summarise complex medical papers, and develop personalised patient education materials. However, these advanced LLMs require proper guidance, and to fully harness the power of these tools, healthcare professionals need to understand the art of prompt engineering—the strategic process of crafting questions or instructions to get the most useful, accurate, and context-aware responses from an AI.


Ambiguous or poorly structured prompts can lead to incorrect or irrelevant outputs, potentially compromising patient safety if misapplied. Whether you're using an LLM for differential diagnosis, treatment planning, or even administrative tasks like scheduling, understanding how to interact with AI ensures better outcomes.


In this edition of AI Horizons, I will explore the principles of effective, prompt engineering, provide practical tips and tricks, and demonstrate real-world applications relevant to healthcare professionals. By the end of this newsletter, you will have the tools necessary to become proficient at communicating with AI and unlock its true potential in your practice.

What is Prompt Engineering, & Why Does it Matter in Healthcare?


Prompt engineering is designing effective input prompts for AI language models to elicit the most relevant and accurate responses. The emergence of AI-powered Large Language Models (LLMs) such as GPT-4 has introduced groundbreaking possibilities in healthcare. Unlike traditional search engines that rely on keywords, LLMs are context-sensitive, meaning that how a question is posed is as significant as the content of the inquiry itself.


A well-constructed prompt establishes clear expectations, provides necessary context, clarifies the desired format or type of response, and directs the tone, complexity, and structure of the output.


The healthcare sector is characterised by complex, nuanced information that is often time-sensitive and demands high accuracy. Inadequate prompts can lead to hallucinations (fabricated responses), incomplete answers, or misinterpretation of intent—outcomes that can pose risks in clinical settings. Prompt engineering addresses this challenge by minimising ambiguity in medical inquiries, extracting guideline-based responses, and tailoring language for specific audiences (e.g., patients versus clinicians), and assisting clinicians in generating summaries, patient instructions, SOAP notes, or discharge letters.


Core Principles of Prompt Engineering


Whether you're consulting an LLM for diagnostic assistance, patient education materials, or administrative tasks, these foundational principles can elevate their output,


Be Specific and Clear:


Vague or ambiguous prompts lead to unclear or incomplete answers. When interacting with an LLM, always specify precisely what you want.

Instead of: “Tell me about diabetes.”


Try:

“Summarise the diagnostic criteria for type 2 diabetes mellitus based on the 2024 ADA guidelines.”


Clarity helps narrow vast knowledge into valuable insights, allowing AI to tailor its response to your specific needs.


Provide Context:


The more information you provide, the more accurate the output will be. Context helps LLMs understand the nuances of your query, and it allows AI generate recommendations aligned with the patient's unique background.


For example:

"The patient is a 68-year-old male with hypertension and CKD stage 3. He presents with elevated potassium levels (6.2 mmol/L). What are the acute management steps?"


Set the Role of the AI:


Role-based prompting increases relevance and accuracy by guiding the model’s tone and content scope.


Prompt:

"You are a board-certified cardiologist. Explain the risk factors of atherosclerosis for a junior doctor."


Incorporate Constraints:


Constraints help LLMs keep the outputs concise and relevant, which is crucial in clinical settings.


Examples include limiting responses to a specific number of words, ensuring compliance with regulatory guidelines, or targeting particular populations.


For example,

"Summarise ADA guidelines for managing type 2 diabetes in 200 words."


Iterative Prompting:


AI outputs often improve through iterative interaction. Don’t expect perfect results from a single query; refine your prompt if the initial response isn't satisfactory.


For example,

“What is the difference between type 1 and type 2 diabetes?”

“Can you add recent research papers from 2024?”

“Can you make a table comparing all the points?

“Can you make a leaflet for patient education?”


Use Structured Formats:


Structured formats make it easier for both humans and machines to interpret information. Defining the output style increases utility, whether it's a list, table, paragraph, or flowchart. Consider breaking down multi-part queries into bullet points or numbered lists:


“For a patient presented with weight loss, tachycardia, increased appetite, nervousness, anxiety, tremors, and changes in bowel habits, analyse the following:


• Possible Diagnoses

• Recommended Investigations

• Initial Management Steps"


Advanced Tips and Tricks for Healthcare Professionals:


Now that we've covered the core principles, let's dive deeper into actionable strategies that healthcare professionals can take for better and detailed outcomes,


Start Simple, Then Scale Up:


Start with simple questions to familiarize yourself and the AI with the context of your question, and gradually step up,


For example,

 Beginner: "List common symptoms of meningitis."

 Intermediate: "Compare bacterial and TB meningitis in pediatric patients under five."

 Advanced: "Develop a management tree for diagnosing meningitis in pediatric patients, including risk factors, imaging findings, and treatment options."


Tailor Responses to Different Audiences:


LLMs can adjust their tone and complexity based on their audience, and their responses vary greatly depending on the target audience.

For example,

 Clinicians: "Explain the role of MRI in early breast cancer detection."

 Patients: "What should a patient expect during a mammogram for breast cancer screening?"


Leverage Medical Terminology:


Using precise medical terminology improves accuracy and reduces ambiguity.

For instance:

"Describe the step-by-step management protocols of ACS (Acute coronary syndromes) according to the latest AHA guidelines."


Validate and Cross-Reference Outputs:


Never rely solely on AI-generated advice; always double-check AI-generated content against trusted sources like peer-reviewed journals, clinical guidelines, or expert opinions. While LLMs are powerful, they can make mistakes and generate incorrect information.


Address Ethical and Legal Considerations:


When working with sensitive data, ensure compliance with privacy laws like HIPPA and GDPR. Frame your prompts carefully to avoid disclosing identifiable patient information. Additionally, ethical implications should be considered when automating clinical decisions.

Example:

"Design a script for discussing mental health resources with older adults, prioritizing confidentiality and empathy."


Common Pitfalls and How to Avoid Them:

While prompt engineering offers immense value, pitfalls exist that can hinder success. These pitfalls include vague prompts, blind trust, and ignoring ethical implications.


Real-World Applications of Prompt Engineering in Healthcare: Let’s examine some practical scenarios where prompt engineering enhances clinical workflows:


Differential Diagnosis Support:


As a physician, if you encounter a challenging case involving multiple overlapping symptoms, you can solicit a potential diagnosis from an LLM by using a well-crafted prompt,

Example Prompt:

"A 52-year-old male presents with fever, rash, and joint pain. Develop a differential diagnosis list and recommend initial lab investigations."


Personalised Patient Education:


An oncologist wants to educate a newly diagnosed breast cancer patient about her treatment options.

They can use LLMs to craft patient-centered education materials and enhance patient-doctor communication and informed decision-making.

Example Prompt:

"Write a two-page handout explaining lumpectomy versus mastectomy for early-stage breast cancer, emphasising risks, benefits, and recovery timelines."

If patients speak a different language, you can even use LLMs to educate them in that language.


Streamlining Administrative Workflows:


By automating repetitive tasks, healthcare professionals can save precious time.

Example Prompt:

"Turn this patient interview transcript into a SOAP note format."

"Compose a letter to an insurance provider requesting pre-approval for an MRI for a patient presenting with persistent severe headaches."


Research Synthesis:


A resident preparing for grand rounds seeks a quick overview of recent developments regarding a specific condition, can use LLMs to do so,

Example Prompt:

"Summarize recent advancements in CAR-T cell therapy for treating multiple myeloma, highlighting benefits, risks, and approval status."


Medical Writing and Content Creation:


Healthcare professionals use LLMs to draft blogs, newsletters, patient leaflets, and continuing education material. They can also use LLMs to generate questionnaires and self-assessment forms,

Prompt Example:

"Write a 500-word blog post on gestational diabetes, its symptoms, causes, diagnosis, and management."

"Generate 10 MCQs with answers on Hyperthyroidism and Hypothyroidism for Endocrinology revision.”


The Future of Prompt Engineering in Medicine


As AI continues to evolve, so are the techniques used to interact with it. Advances in multimodal AI & LLMs, explainability, and domain-specific fine-tuning promise even greater capabilities for healthcare professionals. Imagine being able to upload radiographic images alongside textual descriptions to receive integrated diagnostic insights—or leveraging AI to simulate complex surgical procedures in virtual environments.


However, these advancements also bring challenges, and maintaining accountability and transparency becomes even more crucial. By mastering prompt engineering, healthcare professionals can bridge the gap between cutting-edge technology and compassionate care.


Prompt engineering is a technical skill that serves as a bridge between human expertise and machine intelligence, empowering healthcare professionals to leverage AI responsibly and effectively. By learning to craft powerful prompts, you can unlock the full potential of AI as your assistant, educator, and productivity booster. You'll need to start experimenting today and build your prompt library. You can test what works best in your speciality and hospital setting, and remember, AI is only as intelligent as the questions you ask.


The future of medicine is not AI vs. doctors—it's AI with doctors who know how to prompt it effectively.


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